CDS

Accession Number TCMCG081C18457
gbkey CDS
Protein Id XP_010655487.1
Location join(2051979..2052079,2052176..2052320,2053004..2053078,2055036..2055125,2055355..2055434,2056999..2057068,2057180..2057265,2058562..2058628,2058796..2058891,2062247..2062352,2070408..2070454,2070570..2070653,2070754..2070807,2071502..2071602,2073887..2073977,2074097..2074261,2076558..2076647,2076939..2077010,2081060..2081158,2081329..2081415,2082916..2082969,2083151..2083230,2083517..2083661)
Gene LOC100257193
GeneID 100257193
Organism Vitis vinifera

Protein

Length 694aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010657185.2
Definition PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTCAGTTCTGGAAACCAGGATCGGAGAAGCCTCGCCTCCTCGACGACGAGGAAGGCGGAGTTCTCTTCTACTCCGCTTCTGCTTCTTCCTCCTCTGGATTTGGGTATTCGAACATCGAGAAGCAGAGGCAGAGGCTTCCAGTCTACAAGTACCGAACCGCTATTCTCTATTTAGTGGAGACTCACGCCACCACCATTATTGTTGGAGAGACTGGTAGTGGAAAAACCACCCAGATTCCGCAGTACCTCAAAGAAGCAGGTTGGGCAGATGGTGGCCGTGTAATAGCTTGCACCCAACCAAGACGTCTTGCTGTCCAGGCCGTTGCTTCAAGGGTGGCTGAGGAGATGGGTGTCAAGCTAGGGGAGGAAGTTGGCTATACAATTCGATTTGAAGATCTTAGTAAAACAGGTGTAACGATGGTAAAATTTCTCACAGATGGGGTGTTACTAAGGGAAATGATGGATGATCCCCTTTTAACAAAGTATAGTGTCATAATGGTAGATGAGGCTCATGAAAGGTCCCTGTCAACGGACATCTTATTAGGTCTCCTGAAAAAGATCCAACGGCGTCGACCTGAGCTGCGTCTGATAATCTCTTCAGCTACAATTGAAGCAAAATCAATGTCCACTTTCTTCCAGACCAGAAAGCGTCGAGGTCTGGAAGGTGAGGAGTCAGGACCAAGGACAGATCCTGCCATTCTATCGGTTGAGGGTAGAGGATTTAATGTGCAAATTCATCATATTGAGGAGCCTGTCCCAGACTATCTTCAAGCTGCTGTTTCAACTGTTTTGTCAATTCATGAACAGGAACCTATGGGCGATATTCTGGTATTTCTCACAGGTGAAAATGATATAGATGCTGCCGTCCAGTTGCTTAATGAAGAAGCTCAAAATAATGGGAAGCACTCTTCAGGATTGGTTGTTTTGCCTTTGTACTCTGGACTCTCACGTGCAGATCAGGACCTTGTATTTTCTCCTACTCCTAGAGGAAAGAGGAAAGTGGTGATATCAACAAATATTGCAGAGACATCATTGACTTTGGAGGGCATTGTCTATGTTGTTGATAGTGGGTTCTCAAAACAGCGATTTTATAATCCGATATCAGATATTGAAAATTTGGTTGTGGCACCGATATCCAAGGCATCTGCTAGACAAAGGGCTGGTAGAGCTGGAAGAGTGCGACCAGGGAAGTGTTACAGGCTATACACAGAAGAGTATTTTGTCAATGAGATGTCAGCTCATGCTATTCCAGAAATGCAGAGATCAAACCTTGTTTCCTGTGTGATTCAGTTGAAGGCTTTAGGCATAGATAATATACTAGGCTTTGATTGGCCGGCGTCTCCATCACCTGAAGCAATGATTAGAGCACTTGAAGTGCTCTATTCACTAGGAGTTCTTGATGATGATGCCAAACTTACTTCACCTCTTGGGTTTCAAGTTGCAGAGATTCCACTAGATCCAATGATCTCAAAAACGATATTATCTTCAAACCAACTTGGGTGTTCTGAGGAGATCATCACTATTGCTGCCATTCTTTCTGTTCAGTCTATCTGGGTTTCTGCTCGAGGAGCACAAAGGGAGCTGGATGAAGCCAAGATGAGATTTGCTGCTGCTGAGGGTGACCATGTGACCTACCTAAGTGTATACAAAGGATTTATTCAATCGGGTAAATCTTCACAGTGGTGCTATAAGAACTTTATAAACTACCATGCAATGAAAAAAGTGATTGAAATTAGAGAACAACTCAGAAGAATAGCACAACGATTGGGCATAGTCTTAAAATCTTGTGAAAGAGATATGGAGGTGGTAAGGAAGGCAGTCACTGCTGGGTTTTTTGCTAATGCTTGCTGCTTAGAAGCACACAGTCAAGGTGGAATGTACAAGACCATTAGAAGTGCCCAAGAAGTTTATATTCATCCATCATCAGTATTATTCAGAGTTAATCCAAAGTGGATTATATACAATTCTCTTGTCTCAACTGATCGACAATACATGCGCAATGTCATTTCCATAGACCCTTCTTGGCTTATGGAGGCTGCTCCACATTTTTACCGGCAACAACGCAATCCTATTGCTTCTTGA
Protein:  
MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKLGEEVGYTIRFEDLSKTGVTMVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSLSTDILLGLLKKIQRRRPELRLIISSATIEAKSMSTFFQTRKRRGLEGEESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQNNGKHSSGLVVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPLGFQVAEIPLDPMISKTILSSNQLGCSEEIITIAAILSVQSIWVSARGAQRELDEAKMRFAAAEGDHVTYLSVYKGFIQSGKSSQWCYKNFINYHAMKKVIEIREQLRRIAQRLGIVLKSCERDMEVVRKAVTAGFFANACCLEAHSQGGMYKTIRSAQEVYIHPSSVLFRVNPKWIIYNSLVSTDRQYMRNVISIDPSWLMEAAPHFYRQQRNPIAS